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Latest publications

The research performed at Plant Physiology is peer-reviewed and published in international scientific journals. Publications together with Doctoral and Licentiate thesis from the department, that are present in DiVA (Digitala vetenskapliga arkivet) are listed below.

Latest publications

A synthetic auxin for cloning mature trees
Nature Biotechnology
Bellini, Catherine
ABI5 binding proteins: key players in coordinating plant growth and development
Trends in Plant Science
Vittozzi, Ylenia; Krüger, Thorben; Majee, Adity; et al.
ChloroSpec: A new in vivo chlorophyll fluorescence spectrometer for simultaneous wavelength- and time-resolved detection
Physiologia Plantarum, John Wiley & Sons 2024, Vol. 176, (2)
Nanda, Sanchali; Shutova, Tatiana; Cainzos, Maximiliano; et al.
Editorial: CONSTANS – signal integration and development throughout the plant kingdom
Frontiers in Plant Science, Frontiers Media S.A. 2024, Vol. 15
Nogueira, Fabio T. S.; Goretti, Daniela; Valverde, Federico
Effect of copper oxide and zinc oxide nanoparticles on photosynthesis and physiology of Raphanus sativus L. under salinity stress
Plant physiology and biochemistry (Paris), Elsevier 2024, Vol. 206
Mahawar, Lovely; Živčák, Marek; Barboricova, Maria; et al.
Fungal-bacterial combinations in plant health under stress: physiological and biochemical characteristics of the filamentous fungus serendipita indica and the actinobacterium zhihengliuella sp. ISTPL4 under in vitro arsenic stress
Microorganisms, MDPI 2024, Vol. 12, (2)
Sharma, Neha; Koul, Monika; Joshi, Naveen Chandra; et al.
Genomic basis of seed colour in quinoa inferred from variant patterns using extreme gradient boosting
Plant Biotechnology Journal
Sandell, Felix L.; Holzweber, Thomas; Street, Nathaniel; et al.
Genomic basis of the distinct biosynthesis of β-glucogallin, a biochemical marker for hydrolyzable tannin production, in three oak species
New Phytologist
Yang, Qinsong; Li, Jinjin; Wang, Yan; et al.
Inducible pluripotent suspension cell cultures (iPSCs) to study plant cell differentiation
Xylem: methods and protocols, New York: Humana Press 2024 : 171-200
Ménard, Delphine; Serk, Henrik; Decou, Raphaël; et al.
Methane production from locally available ruminant feedstuffs in Ethiopia: an in vitro study
Animal Feed Science and Technology, Vol. 312
Bekele, Wondimagegne; Huhtanen, Pekka; Zegeye, Abiy; et al.
Microbiological assessment of success and failure in pulp revitalization: a randomized clinical trial using calcium hydroxide and chlorhexidine gluconate in traumatized immature necrotic teeth
Journal of Oral Microbiology, Taylor & Francis Group 2024, Vol. 16, (1)
Wikström, Alina; Romani Vestman, Nelly; Rakhimova, Olena; et al.
Multiple roles of glycerate kinase—from photorespiration to gluconeogenesis, C4 metabolism, and plant immunity
International Journal of Molecular Sciences, MDPI 2024, Vol. 25, (6)
Kleczkowski, Leszek A.; Igamberdiev, Abir U.
Plant uncoupling mitochondrial protein 2 localizes to the Golgi
Plant Physiology, American Society of Plant Biologists 2024, Vol. 194, (2) : 623-628
Fuchs, Philippe; Feixes-Prats, Elisenda; Arruda, Paulo; et al.
Plant-LncPipe: a computational pipeline providing significant improvement in plant lncRNA identification
Horticulture Research, Vol. 11, (4)
Tian, Xue-Chan; Chen, Zhao-Yang; Nie, Shuai; et al.
Plant-LncPipe: a computational pipeline providing significant improvement in plant lncRNA identification
Horticulture Research, Oxford University Press 2024, Vol. 11, (4)
Tian, Xue-Chan; Chen, Zhao-Yang; Nie, Shuai; et al.
Profiling of 1-aminocyclopropane-1-carboxylic acid and selected phytohormones in Arabidopsis using liquid chromatography-tandem mass spectrometry
Plant Methods, BioMed Central (BMC) 2024, Vol. 20, (1)
Karady, Michal; Hladík, Pavel; Cermanová, Kateřina; et al.
Progress in phylogenetics, multi-omics and flower coloration studies in Rhododendron
Ornamental Plant Research, Maximum Academic Press 2024, Vol. 4
Nie, Shuai; Ma, Hai-Yao; Shi, Tian-Le; et al.
Pseudomonas syringae infectivity correlates to altered transcript and metabolite levels of Arabidopsis mediator mutants
Scientific Reports, Springer Nature 2024, Vol. 14, (1)
Blomberg, Jeanette; Tasselius, Viktor; Vergara, Alexander; et al.
S1 basic leucine zipper transcription factors shape plant architecture by controlling C/N partitioning to apical and lateral organs
Proceedings of the National Academy of Sciences of the United States of America, Proceedings of the National Academy of Sciences (PNAS) 2024, Vol. 121, (7)
Kreisz, Philipp; Hellens, Alicia M.; Fröschel, Christian; et al.
'Seeing' the electromagnetic spectrum: spotlight on the cryptochrome photocycle
Frontiers in Plant Science, Frontiers Media S.A. 2024, Vol. 15
Aguida, Blanche; Babo, Jonathan; Baouz, Soria; et al.
The super-pangenome of Populus unveils genomic facets for its adaptation and diversification in widespread forest trees
Molecular Plant
Shi, Tingting; Zhang, Xinxin; Hou, Yukang; et al.
Whole-genome resequencing facilitates the development of a 50K single nucleotide polymorphism genotyping array for Scots pine (Pinus sylvestris L.) and its transferability to other pine species
The Plant Journal, John Wiley & Sons 2024, Vol. 117, (3) : 944-955
Estravis Barcala, Maximiliano; van der Valk, Tom; Chen, Zhiqiang; et al.
A phloem-localized Arabidopsis metacaspase (AtMC3) improves drought tolerance
New Phytologist, John Wiley & Sons 2023, Vol. 239 : 1281-1299
Pitsili, Eugenia; Rodriguez-Trevino, Ricardo; Ruiz-Solani, Nerea; et al.
A simple sonication method to isolate the chloroplast lumen in Arabidopsis thaliana
Bio-protocol, Bio-Protocol, LLC 2023, Vol. 13, (15)
Hao, Jingfang; Malnoë, Alizée
Amino acid conjugation of oxIAA is a secondary metabolic regulation involved in auxin homeostasis
New Phytologist, John Wiley & Sons 2023, Vol. 238, (6) : 2264-2270
Brunoni, Federica; Pěnčík, Aleš; Žukauskaitė, Asta; et al.
An interplay between bZIP16, bZIP68, and GBF1 regulates nuclear photosynthetic genes during photomorphogenesis in Arabidopsis
New Phytologist, John Wiley & Sons 2023, Vol. 240, (3) : 1082-1096
Norén Lindbäck, Louise; Ji, Yan; Cervela-Cardona, Luis; et al.
An Okinawan-Based Nordic Diet Leads to Profound Effects on Gut Microbiota and Plasma Metabolites Linked to Glucose and Lipid Metabolism
Nutrients, MDPI 2023, Vol. 15, (14)
Manoharan, Lokeshwaran; Roth, Bodil; Bang, Corinna; et al.
Cauliflower mosaic virus protein P6 is a multivalent node for RNA granule proteins and interferes with stress granule responses during plant infection
The Plant Cell, Oxford University Press 2023, Vol. 35, (9) : 3363-3382
Hoffmann, Gesa; López-González, Silvia; Mahboubi, Amir; et al.
Cell wall dynamics: novel tools and research questions
Journal of Experimental Botany, Oxford University Press 2023, Vol. 74, (21) : 6448-6467
Baez, Luis Alonso; Bacete, Laura
Chemical induction of hypocotyl rooting reveals extensive conservation of auxin signalling controlling lateral and adventitious root formation
New Phytologist, New Phytologist Foundation 2023, Vol. 240, (5) : 1883-1899
Zeng, Yinwei; Verstraeten, Inge; Trinh, Hoang Khai; et al.
Chitin degradation by Synechococcus WH7803
Scientific Reports, Springer Nature 2023, Vol. 13, (1)
Capovilla, Giovanna; Castro, Kurt G.; Collani, Silvio; et al.
Chitosan-modified polyethyleneimine nanoparticles for enhancing the carboxylation reaction and plants' CO2 uptake
ACS Nano, American Chemical Society (ACS) 2023, Vol. 17, (4) : 3430-3441
Routier, Cyril; Vallan, Lorenzo; Daguerre, Yohann; et al.
Chromosome‐scale genome assembly and insights into the metabolome and gene regulation of leaf color transition in an important oak species, Quercus dentata
New Phytologist, John Wiley & Sons 2023, Vol. 238, (5) : 2016-2032
Wang, Wen‐Bo; He, Xiang‐Feng; Yan, Xue‐Mei; et al.
Comparison of plastid proteomes points towards a higher plastidial redox turnover in vascular tissues than in mesophyll cells
Journal of Experimental Botany, Oxford University Press 2023, Vol. 74, (14) : 4110-4124
Boussardon, Clément; Carrie, Chris; Keech, Olivier
Confined-microtubule assembly shapes three-dimensional cell wall structures in xylem vessels
Nature Communications, Springer Nature 2023, Vol. 14, (1)
Sasaki, Takema; Saito, Kei; Inoue, Daisuke; et al.
Cracking the green wall code: insights into cell wall integrity across organisms
Frontiers in Plant Physiology, Frontiers Media S.A. 2023, Vol. 1
Vukašinović, Nemanja; Serif, Manuel; Bacete, Laura
David (Dave) Charles Fork (1929–2020): a gentle human being, a great experimenter, and a passionate researcher
Photosynthesis Research, Springer Netherlands 2023, Vol. 155, (1) : 107-125
Govindjee, Govindjee; Peterson, Laurie Fork; Satoh, Kazuhiko; et al.
Different combinations of laccase paralogs nonredundantly control the amount and composition of lignin in specific cell types and cell wall layers in Arabidopsis
The Plant Cell, Oxford University Press 2023, Vol. 35, (2) : 889-909
Blaschek, Leonard; Murozuka, Emiko; Serk, Henrik; et al.
Differential gene expression and potential regulatory network of fatty acid biosynthesis during fruit and leaf development in yellowhorn (Xanthoceras sorbifolium), an oil-producing tree with significant deployment values
Frontiers in Plant Science, Frontiers Media S.A. 2023, Vol. 14
Shi, Tian-Le; Ma, Hai-Yao; Wang, Xinrui; et al.
Dynamics and mechanics of plant cell walls: insights into plant growth, defence, and stress response
Plant Molecular Biology, Springer Nature 2023, Vol. 113, (6) : 329-330
Bacete, Laura; Mélida, Hugo
Editorial: Omics driven research for the improvement of industrial crops
Frontiers in Plant Science, Vol. 14
Gaur, Rajarshi Kumar; Yadav, Dinesh; Albrectsen, Benedicte Riber
Exploring redox modulation of plant UDP-glucose pyrophosphorylase
International Journal of Molecular Sciences, MDPI 2023, Vol. 24, (10)
Decker, Daniel; Aubert, Juliette; Wilczynska, Malgorzata; et al.
Flavodiiron-mediated O2 photoreduction at photosystem I acceptor-side provides photoprotection to conifer thylakoids in early spring
Nature Communications, Springer Nature 2023, Vol. 14, (1)
Bag, Pushan; Shutova, Tatiana; Shevela, Dmitriy; et al.
Flexure wood formation via growth reprogramming in hybrid aspen involves jasmonates and polyamines and transcriptional changes resembling tension wood development
New Phytologist, John Wiley & Sons 2023, Vol. 240, (6) : 2312-2334
Urbancsok, János; Donev, Evgeniy N.; Sivan, Pramod; et al.
Fluorogenic properties of 4-dimethylaminocinnamaldehyde (DMACA) enable high resolution imaging of cell-wall-bound proanthocyanidins in plant root tissues
Frontiers in Plant Science, Frontiers Media S.A. 2023, Vol. 13
Chowdhury, Jamil; Ferdous, Jannatul; Lihavainen, Jenna; et al.
Formate overflow drives toxic folate trapping in MTHFD1 inhibited cancer cells
Nature Metabolism, Springer Nature 2023, Vol. 5, (4) : 642-659
Green, Alanna C.; Marttila, Petra; Kiweler, Nicole; et al.
Genetic engineering for heavy metal/metalloid stress tolerance in plants
Heavy metal toxicity and tolerance in plants: a biological, omics, and genetic engineering approach, John Wiley & Sons 2023 : 573-592
Hossain, Mohammad Anwar; Tahjib-Ul-Arif, Md; Jahin, Sopnil Ahmed; et al.
Genetic markers and tree properties predicting wood biorefining potential in aspen (Populus tremula) bioenergy feedstock
Biotechnology for Biofuels and Bioproducts, BioMed Central (BMC) 2023, Vol. 16, (1)
Escamez, Sacha; Robinson, Kathryn M.; Luomaranta, Mikko; et al.
Haplotype-resolved genome assembly of Coriaria nepalensis a non-legume nitrogen-fixing shrub
Scientific Data, Springer Nature 2023, Vol. 10, (1)
Zhao, Shi-Wei; Guo, Jing-Fang; Kong, Lei; et al.
High-throughput characterization of cortical microtubule arrays response to anisotropic tensile stress
BMC Biology, BioMed Central (BMC) 2023, Vol. 21, (1)
Demes, Elsa; Verger, Stéphane
Please find more publications in DiVA
Latest update: 2020-03-05