Publications at the Department of Molecular Biology

DiVA Publications

A CRISPR homing screen finds a chloroquine resistance transporter-like protein of the Plasmodium oocyst essential for mosquito transmission of malaria

Nature Communications, Springer Nature 2025, Vol. 16, (1)

Balakrishnan, Arjun; Hunziker, Mirjam; Tiwary, Puja; et al.

A multi-strategy antimicrobial discovery approach reveals new ways to treat Chlamydia

PLoS biology, Public Library of Science (PLoS) 2025, Vol. 23, (4)

Ölander, Magnus; Rea Vázquez, Daniel; Meier, Karsten; et al.

A new understanding of Acanthamoeba castellanii: dispelling the role of bacterial pore-forming toxins in cyst formation and amoebicidal actions

Cell Death Discovery, Springer Nature 2025, Vol. 11, (1)

Yabrag, Abdelbasset; Ullah, Naeem; Baryalai, Palwasha; et al.

A non-invasive 25-Gene PLNM-Score urine test for detection of prostate cancer pelvic lymph node metastasis

Prostate Cancer and Prostatic Diseases, Springer Nature 2025, Vol. 28 : 94-102

Guo, Jinan; Gu, Liangyou; Johnson, Heather; et al.

A scalable CRISPR-Cas9 gene editing system facilitates CRISPR screens in the malaria parasite Plasmodium berghei

Nucleic Acids Research, Oxford University Press 2025, Vol. 53, (2)

Jonsdottir, Thorey K.; Paoletta, Martina; Ishizaki, Takahiro; et al.

Adaptive evolutionary trajectories in complexity: transitions between unicellularity and facultative differentiated multicellularity

Proceedings of the National Academy of Sciences of the United States of America, Proceedings of the National Academy of Sciences (PNAS) 2025, Vol. 122, (4)

Isaksson, Hanna; Lind, Peter A; Libby, Eric

An extreme mutational hotspot in nlpD depends on transcriptional induction of rpoS

PLOS Genetics, Public Library of Science (PLoS) 2025, Vol. 21, (1)

Farr, Andrew D.; Vasileiou, Christina; Lind, Peter A; et al.

Antibacterial compounds against non-growing and intracellular bacteria

npj Antimicrobials and Resistance, Springer Nature 2025, Vol. 3, (1)

Kaldalu, Niilo; Bērziņš, Normunds; Berglund Fick, Stina; et al.

Anti-cancer potential of a new derivative of Caffeic Acid Phenethyl Ester targeting the centrosome

Redox Biology, Elsevier 2025, Vol. 81

Giordano, Catello; Kendler, Jonatan; Sexl, Maximilian; et al.

Bacteria use exogenous peptidoglycan as a danger signal to trigger biofilm formation

Nature Microbiology, Springer Nature 2025, Vol. 10, (1) : 144-157

Vaidya, Sanika; Saha, Dibya; Rode, Daniel K. H.; et al.

Bacterial peptidoglycan recycling

Trends in Microbiology, Elsevier 2025, Vol. 33, (3) : 340-353

Gilmore, Michael C.; Cava, Felipe

Behaviour-based movement cut-off points in 3-year old children comparing wrist- with hip-worn actigraphs MW8 and GT3X

PLOS ONE, Public Library of Science (PLoS) 2025, Vol. 20, (3)

Jansson, Daniel; Westlander, Rikard; Sandlund, Jonas; et al.

Characterisation of proteins along the secretory pathway in the blood stages of the malaria parasite Plasmodium berghei

Umeå University medical dissertations, 2365

Hernandez, Sophia Raine C.

Chlorhexidine-loaded zinc nanoparticles: a potent antibacterial agent against streptococcus pneumoniae

Current Microbiology, London: Springer Nature 2025, Vol. 82, (7)

Kumar, Rakesh; Sharma, Renu; Kaura, Sushila; et al.

Combined in situ transcriptomic and immunofluorescence to assess the effects on DNA damage and innate immune responses induced by bacterial genotoxin in in vivo models

Oncogene-induced senescence: methods and protocols, New York: Humana Press 2025 : 149-175

Lopez Chiloeches, Maria; Frisan, Teresa

Comprehensive genomic insights into a highly pathogenic clone ST656 of mcr8.1 containing multidrug-resistant Klebsiella pneumoniae from Bangladesh

Scientific Reports, Nature Publishing Group 2025, Vol. 15, (1)

Mondol, Spencer Mark; Hossain, Mohammed Aziz; Haque, Fahim Kabir Monjurul

Deficiency in peptidoglycan recycling promotes β-lactam sensitivity in Caulobacter crescentus

mBio, American Society for Microbiology 2025, Vol. 16, (4)

Modi, Malvika; Chauhan, Deepika; Gilmore, Michael C.; et al.

Draft genome analysis of a serum-resistant and fourth-generation cephalosporin (cefepime)-resistant Acinetobacter baumannii strain TDU5 isolated from Dhaka, Bangladesh

Microbiology Resource Announcements, American Society for Microbiology 2025, Vol. 14, (4) : 1-3

Mondol, Spencer Mark; Hossain, Mohammed Aziz; Haque, Fahim Kabir Monjurul

Exploring risk factors and antimicrobial susceptibility patterns associated with bacteriuria among Syrian refugees in makeshift camps

Journal of Hospital Infection, Elsevier 2025, Vol. 157 : 45-55

Kilani, M.; Al-Jamal, H.; Kasir, D.; et al.

Gain of chromosome 17 is an early genetic abnormality in neuroblastoma with PPM1D emerging as a strong candidate oncogene driving tumor progression

Cancer Letters, Elsevier 2025, Vol. 625

Milosevic, Jelena; Fransson, Susanne; Svensson, Johanna; et al.

Genome-scale resources in the infant gut symbiont Bifidobacterium breve reveal genetic determinants of colonization and host-microbe interactions

Cell, Cell Press 2025, Vol. 188, (7) : 2003-2021.e19

Shiver, Anthony L.; Sun, Jiawei; Culver, Rebecca; et al.

Green synthesis of iron oxide nanoparticles using Bacillus subtilis to mitigate salinity stress in rice (Oryza sativa L.) plants and enhance physiological activities

Environmental Science: Nano, Royal Society of Chemistry 2025, Vol. 12, (4) : 2421-2435

Naik, Hetvi; Manoharadas, Salim; Bommayasamy, Narayanasamy; et al.

High-resolution mapping of sigma factor DNA-binding sequences using artificial promoters, RNA aptamers, and deep sequencing

Nucleic Acids Research, Oxford University Press 2025, Vol. 53, (7)

Khan, Essa Ahsan; Rückert-Reed, Christian; Dahiya, Gurvinder Singh; et al.

Imaging and outcome correlates of ctDNA methylation markers in prostate cancer: a comparative, cross-sectional [⁶⁸Ga]Ga-PSMA-11 PET/CT study

Clinical Epigenetics, BioMed Central (BMC) 2025, Vol. 17, (1)

Kluge, Kilian; Lotz, Vincent; Einspieler, Holger; et al.

In silico pharmacological and pharmacokinetic study of marmeline from bael fruit for the treatment of Alzheimer’s disease

Advances in Pharmacological and Pharmaceutical Sciences, John Wiley & Sons 2025, Vol. 2025, (1)

Ongtanasup, Tassanee; Jampa, Onkamon; Suwannakul, Nattawan; et al.

inDrops-2: a flexible, versatile and cost-efficient droplet microfluidic approach for high-throughput scRNA-seq of fresh and preserved clinical samples

Nucleic Acids Research, Oxford University Press 2025, Vol. 53, (2)

Juzenas, Simonas; Goda, Karolis; Kiseliovas, Vaidotas; et al.

Investigating the microbiome in relation to mental distress across two points during pregnancy: data from U.S. and Swedish cohorts

Biological Psychiatry Global Open Science, Elsevier 2025, Vol. 5, (3)

Kimmel, Mary; Tong, Bangzhuo; Edbom Devall, Alfons; et al.

Label-free nano- and microplastics detection in mammalian tissue by photothermal infrared spectroscopy

Optical biopsy XXIII: toward real-time spectroscopic imaging and diagnosis

Karl, Verena; Duswald, Kristina; Pichler, Verena; et al.

Maintenance of cell wall remodeling and vesicle production are connected in Mycobacterium tuberculosis

eLIFE, eLife Sciences Publications Ltd 2025, Vol. 13

Salgueiro-Toledo, Vivian C.; Bertol, Jorge; Gutierrez, Claude; et al.

MiNEApy: enhancing enrichment network analysis in metabolic networks

Bioinformatics, Oxford University Press 2025, Vol. 41, (3)

Pandey, Vikash

Mycogenic synthesis of iron oxide nanoparticles (IONPs) for managing bacterial wilt in tomato (Solanum lycopersicum) caused by Ralstonia solanacearum: disease suppression, growth promotion and soil health improvement

New Journal of Chemistry, Royal Society of Chemistry 2025, Vol. 49, (14) : 5854-5864

Naik, Hetvi; Manoharadas, Salim; Bommayasamy, Narayanasamy; et al.

New Journal of Chemistry, Royal Society of Chemistry 2025, Vol. 49, (14) : 5854-5864

Naik, Hetvi; Manoharadas, Salim; Bommayasamy, Narayanasamy; et al.

Not just monkey business

Science, American Association for the Advancement of Science (AAAS) 2025, Vol. 387, (6734) : 582-583

Moon, Robert W.; Bushell, Ellen S. C.

Pore-forming toxin-like proteins in the anti-parasitoid immune response of drosophila

Journal of Innate Immunity, S. Karger 2025, Vol. 17, (1) : 10-28

Magyar, Lilla B.; Ábrahám, Edit; Lipinszki, Zoltán; et al.

Preclinical in vitro and in vivo evidence for targeting CD74 as an effective treatment strategy for cutaneous T-cell lymphomas

British Journal of Dermatology, Oxford University Press 2025, Vol. 192, (5) : 883-895

Costanza, Mariantonia; Giordano, Catello; von Brünneck, Ann-Christin; et al.

Production of detergent-free PET and biodegradable PBAT micro- and nanoplastics

Journal of Hazardous Materials, Elsevier 2025, Vol. 493

Kogler, Lukas; Stellnberger, Sarah; Schwingenschlögl-Maisetschläger, Verena; et al.

Shaker/Kv1 potassium channel SHK-1 protects against pathogen infection and oxidative stress in C. elegans

PLOS Genetics, Public Library of Science (PLoS) 2025, Vol. 21, (2)

Pu, Longjun; Wang, Jing; Nilsson, Lars; et al.

Single-cell and chromatin accessibility profiling reveals regulatory programs of pathogenic Th2 cells in allergic asthma

Nature Communications, Springer Nature 2025, Vol. 16, (1)

Khan, Matarr; Alteneder, Marlis; Reiter, Wolfgang; et al.

Spatial, temporal and numerical regulation of polar flagella assembly in Pseudomonas putida

Microbiological Research, Elsevier 2025, Vol. 292

Pulido-Sánchez, Marta; Leal-Morales, Antonio; López-Sánchez, Aroa; et al.

Teaching protein structure and function through molecular visualization

Biochemistry and molecular biology education, John Wiley & Sons 2025, Vol. 53, (1) : 15-20

Baland, Elisabeth; Pérez, Lucía; Mateus, André

Telomemore enables single-cell analysis of cell cycle and chromatin condensation

Nucleic Acids Research, Oxford University Press 2025, Vol. 53, (3)

Yakovenko, Iryna; Mihai, Ionut Sebastian; Selinger, Martin; et al.

The anti-diabetic PPARγ agonist Pioglitazone inhibits cell proliferation and induces metabolic reprogramming in prostate cancer

Molecular Cancer, BioMed Central (BMC) 2025, Vol. 24, (1)

Atas, Emine; Berchtold, Kerstin; Schlederer, Michaela; et al.

Tumor cells escape immunosurveillance by hampering LFA-1

Frontiers in Immunology, Frontiers Media S.A. 2025, Vol. 16

Upadhyay, Shishir; Murugu, Lewis; Svensson, Lena

A cilia-bound unconventional secretory pathway for Drosophila odorant receptors

BMC Biology, BioMed Central (BMC) 2024, Vol. 22, (1)

Dzaki, Najat; Alenius, Mattias

A conserved ribosomal protein has entirely dissimilar structures in different organisms

Molecular biology and evolution, Oxford University Press 2024, Vol. 41, (1)

Schierholz, Léon; Brown, Charlotte R.; Helena-Bueno, Karla; et al.

A dispensable SepIVA orthologue in Streptomyces venezuelae is associated with polar growth and not cell division

BMC Microbiology, BioMed Central (BMC) 2024, Vol. 24, (1)

Sen, Beer Chakra; Mavi, Parminder Singh; Irazoki, Oihane; et al.

A distinctive family of L,D-transpeptidases catalyzing L-Ala-mDAP crosslinks in Alpha- and Betaproteobacteria

Nature Communications, Springer Nature 2024, Vol. 15, (1)

Espaillat, Akbar; Alvarez, Laura; Torrens, Gabriel; et al.

A history of repeated antibiotic usage leads to microbiota-dependent mucus defects

Gut microbes, Taylor & Francis 2024, Vol. 16, (1)

Krigul, Kertu Liis; Feeney, Rachel H.; Wongkuna, Supapit; et al.

A naturally occurring mitochondrial genome variant confers broad protection from infection in Drosophila

PLOS Genetics, Public Library of Science (PLoS) 2024, Vol. 20, (11)

Salminen, Tiina S.; Vesala, Laura; Basikhina, Yuliya; et al.

A peptidoglycan N-deacetylase specific for anhydroMurNAc chain termini in Agrobacterium tumefaciens

Journal of Biological Chemistry, Elsevier 2024, Vol. 300, (2)

Gilmore, Michael C.; Yadav, Akhilesh K.; Espaillat, Akbar; et al.

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Latest update: 2023-01-24