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Publications

2025

Singh B, Fredriksson Sundbom M, Muthukrishnan U, et al. Extracellular Histones as Exosome Membrane Proteins Regulated by Cell Stress. J Extracell Vesicles. 2025;14(2):e70042. doi:https://doi.org/10.1002/jev2.70042 

Liu L, Bano F, Conca DV, et al. Recruitment of apolipoprotein E facilitates Herpes simplex virus 1 attachment and release. npj Viruses. 2025;3(1):13. doi:10.1038/s44298-025-00099-9

Baryalai P, Irenaeus D, Toh E, et al. Hemagglutinin Protease HapA Associated With Vibrio cholerae Outer Membrane Vesicles (OMVs) Disrupts Tight and Adherens Junctions. J Extracell vesicles. 2025;14(5):e70092. doi:10.1002/jev2.70092

Toh E, Baryalai P, Nadeem A, et al. Sublytic Activity of a Pore-Forming Protein From Commensal Bacteria Causes Epigenetic Modulation of Tumour-Affiliated Protein Expression. J Extracell vesicles. 2025;14(8):e70149. doi:10.1002/jev2.70149.

Conca DV, Bano F, Graul M, et al. Variant-Specific Interactions at the Plasma Membrane: Heparan Sulfate’s Impact on SARS-CoV-2 Binding Kinetics. Anal Chem. 2025;97(8):4318-4328. doi:10.1021/acs.analchem.4c04283

Ölander M, Rea Vázquez D, Meier K, et al. A multi-strategy antimicrobial discovery approach reveals new ways to treat Chlamydia. PLoS Biol. 2025;23(4):e3003123. doi:10.1371/journal.pbio.3003123

Rehman ZU, Obi I, Nadeem A, Tegtmeyer N, Backert S, Arnqvist A. Bacterial Extracellular Vesicles Exploit Filopodial Surfing and Retraction Mechanisms to Reach the Host Cell Body in an Actin-Dependent Manner. J Extracell vesicles. 2025;14(6):e70107. doi:10.1002/jev2.70107

Bano F, Soria-Martinez L, van Bodegraven D, et al. Site-specific sulfations regulate the physicochemical properties of papillomavirus–heparan sulfate interactions for entry. Sci Adv. 2025;10(40):eado8540. doi:10.1126/sciadv.ado8540

Esteva-Socias M, Bhattarai DP, Achour C, et al. METTL3 regulates exocytosis independently of m6A. bioRxiv. Published online January 1, 2025:2025.05.26.656168. doi:10.1101/2025.05.26.656168

Yau W-L, Peters MBA, Rönfeldt S, et al. The ACBD3 protein coordinates ER-Golgi contacts to enable productive TBEV infection. J Virol. Published online April 2025:e0222424. doi:10.1128/jvi.02224-24

Corredor L, Vergou GA, Skalický V, et al. Apoptotic bodies in phytoplankton suggest evolutionary conservation of cell death mechanisms. Nat Commun. 2025;16(1):8427. doi:10.1038/s41467-025-63956-4

Kumari K, Pérez-Núñez I, Noguera A, et al. METTL3-mediated m6A modification of DNMT1 enhances ovarian cancer progression. bioRxiv. Published online January 1, 2025:2025.09.10.675425. doi:10.1101/2025.09.10.675425

Babu Sait MR, Jachmann LH, Türköz G, et al. Genome-wide identification of modulators of Chlamydia trachomatis parasitophorous vacuole stability highlights an important role for sphingolipid supply. PLoS Biol. 2025;23(8):e3003297. doi:10.1371/journal.pbio.3003297

Zhang J, Herzog LK, Corkery DP, et al. Modular Photoswitchable Molecular Glues for Chemo-Optogenetic Control of Protein Function in Living Cells. Angew Chemie Int Ed. 2025;n/a(n/a):e202416456. doi:https://doi.org/10.1002/anie.202416456

Cumming J, Maneshi P, Dongre M, et al. Dissecting FAP+ Cell Diversity in Pancreatic Cancer Uncovers an Interferon-Response Subtype of Cancer-Associated Fibroblasts with Tumor-Restraining Properties. Cancer Res. Published online April 2025. doi:10.1158/0008-5472.CAN-23-3252

Groza P, Kumari K, Schott J, et al. Fibrillarin shapes oncogenic protein pools and ribosomal composition in triple-negative breast cancer. bioRxiv. Published online January 1, 2025:2025.03.21.644506. doi:10.1101/2025.03.21.644506

Jonsdottir TK, Paoletta MS, Ishizaki T, et al. A scalable CRISPR-Cas9 gene editing system facilitates CRISPR screens in the malaria parasite Plasmodium berghei. Nucleic Acids Res. 2025;53(2). doi:10.1093/nar/gkaf005

Zymovets V, Rakhimova O, Schmidt A, et al. Inhibition of infection-associated oral bacteria adhesion by probiotics: In vitro and in vivo models. iScience. 2025;28(5):112412. doi:10.1016/j.isci.2025.112412

Larsson E, Kabedev A, Pace H, et al. Lipid packing contributes to the confinement of caveolae to the plasma membrane. Published online 2025. doi:10.7554/elife.108369.1

Wu Y, Lim Y-W, McMahon K-A, et al. Pro-ferroptotic lipids as key control points for caveola formation and disassembly. Cell Rep. 2025;44(6):115789. doi:https://doi.org/10.1016/j.celrep.2025.115789

2024

Knyazeva A, Li S, Corkery DP, et al. A chemical inhibitor of IST1-CHMP1B interaction impairs endosomal recycling and induces noncanonical LC3 lipidation. Proc Natl Acad Sci U S A. 2024;121(17):e2317680121. doi:10.1073/pnas.2317680121

Mushtaq F, Nadeem A, Yabrag A, et al. Colony phase variation switch modulates antimicrobial tolerance and biofilm formation in Acinetobacter baumannii. Microbiol Spectr. 2024;12(2):e0295623. doi:10.1128/spectrum.02956-23

Holmberg SM, Feeney RH, Prasoodanan P K V, et al. The gut commensal Blautia maintains colonic mucus function under low-fiber consumption through secretion of short-chain fatty acids. Nat Commun. 2024;15(1):3502. doi:10.1038/s41467-024-47594-w

Krigul KL, Feeney RH, Wongkuna S, et al. A history of repeated antibiotic usage leads to microbiota-dependent mucus defects. Gut Microbes. 2024;16(1):2377570. doi:10.1080/19490976.2024.2377570

Malla S, Kumari K, García-Prieto CA, et al. The scaffolding function of LSD1 controls DNA methylation in mouse ESCs. Nat Commun. 2024;15(1):7758. doi:10.1038/s41467-024-51966-7

Nord C, Jones I, Garcia-Maestre M, Hägglund A-C, Carlsson L. Reduced mTORC1-signaling in progenitor cells leads to retinal lamination deficits. Dev Dyn. 2024;253(10):922-939. doi:https://doi.org/10.1002/dvdy.707

Yuan J, Maitra S, Antoniou E, et al. HIF2α negatively regulates MYCN protein levels and promotes a low-risk noradrenergic phenotype in neuroblastoma. bioRxiv. Published online January 1, 2024:2024.11.20.624001. doi:10.1101/2024.11.20.624001

Rosendal E, Lindqvist R, Chotiwan N, Henriksson J, Överby AK. Transcriptional Response to Tick-Borne Flavivirus Infection in Neurons, Astrocytes and Microglia In Vivo and In Vitro. Viruses. 2024;16(8). doi:10.3390/v16081327

Hellman U, Rosendal E, Lehrstrand J, et al. SARS-CoV-2 infection induces hyaluronan production in vitro and hyaluronan levels in COVID-19 patients relate to morbidity and long-term lung impairment: a prospective cohort study. MBio. 2024;15(10):e0130324. doi:10.1128/mbio.01303-24

Garvanska DH, Alvarado RE, Mundt FO, et al. The NSP3 protein of SARS-CoV-2 binds fragile X mental retardation proteins to disrupt UBAP2L interactions. EMBO Rep. 2024;25(2):902-926. doi:10.1038/s44319-023-00043-z

Andreasson M, Donzel M, Abrahamsson A, et al. Exploring the Dispersion and Electrostatic Components in Arene-Arene Interactions between Ligands and G4 DNA to Develop G4-Ligands. J Med Chem. 2024;67(3):2202-2219. doi:10.1021/acs.jmedchem.3c02127

2023

Ahmad, Irfan et al. 2023. “Csu Pili Dependent Biofilm Formation and Virulence of Acinetobacter Baumannii.” NPJ biofilms and microbiomes 9(1): 101.

Becker, Miriam et al. 2023. “Efficient Clathrin-Mediated Entry of Enteric Adenoviruses in Human Duodenal Cells.” Journal of virology 97(10): e0077023.

Chakraborty, Chaitali et al. 2023. “Rewiring of the Promoter-Enhancer Interactome and Regulatory Landscape in Glioblastoma Orchestrates Gene Expression Underlying Neurogliomal Synaptic Communication.” Nature communications 14(1): 6446.

Chotiwan, Nunya et al. 2023. “Type I Interferon Shapes Brain Distribution and Tropism of Tick-Borne Flavivirus.” Nature communications 14(1): 2007.

Corkery, Dale et al. 2023. “Inducin Triggers LC3-Lipidation and ESCRT-Mediated Lysosomal Membrane Repair.” Chembiochem : a European journal of chemical biology 24(24): e202300579.

Corkery, Dale P et al. 2023. “An ATG12-ATG5-TECPR1 E3-like Complex Regulates Unconventional LC3 Lipidation at Damaged Lysosomes.” EMBO reports 24(9): e56841.

Deiana, Marco, José María Andrés Castán, et al. 2023. “A New G-Quadruplex-Specific Photosensitizer Inducing Genome Instability in Cancer Cells by Triggering Oxidative DNA Damage and Impeding Replication Fork Progression.” Nucleic acids research 51(12): 6264–85.

Deiana, Marco, Karam Chand, Erik Chorell, and Nasim Sabouri. 2023. “Parallel G-Quadruplex DNA Structures from Nuclear and Mitochondrial Genomes Trigger Emission Enhancement in a Nonfluorescent Nano-Aggregated Fluorine-Boron-Based Dye.” The journal of physical chemistry letters 14(7): 1862–69.

Larsson, Elin et al. 2023. “Dynamin2 Functions as an Accessory Protein to Reduce the Rate of Caveola Internalization.” The Journal of cell biology 222(4).

Lopez Chiloeches, Maria et al. 2023. “Genotoxin-Producing Salmonella Enterica Induces Tissue-Specific Types of DNA Damage and DNA Damage Response Outcomes.” Frontiers in immunology 14: 1270449.

Meier, Karsten et al. 2023. “The Chlamydia Effector CpoS Modulates the Inclusion Microenvironment and Restricts the Interferon Response by Acting on Rab35.” mBio 14(4): e0319022.

Ölander, Magnus et al. 2023. “A Multi-Strategy Antimicrobial Discovery Approach Reveals New Ways to Combat Chlamydia.” bioRxiv: 2023.11.30.569351. http://biorxiv.org/content/early/2023/11/30/2023.11.30.569351.abstract.

Vincent, Craig A et al. 2023. “Epigenomic Perturbation of Novel EGFR Enhancers Reduces the Proliferative and Invasive Capacity of Glioblastoma and Increases Sensitivity to Temozolomide.” BMC cancer 23(1): 945.

Westin, Ida Maria et al. 2023. “DNA Methylation Changes and Increased MRNA Expression of Coagulation Proteins, Factor V and Thrombomodulin in Fuchs Endothelial Corneal Dystrophy.” Cellular and molecular life sciences : CMLS 80(3): 62.

Yunda, Elena, Mareike Gutensohn, Madeleine Ramstedt, and Erik Björn. 2023. “Methylmercury Formation in Biofilms of Geobacter Sulfurreducens.” Frontiers in microbiology 14: 1079000.

Zymovets, Valeriia et al. 2023. “Exploring the Impact of Oral Bacteria Remnants on Stem Cells from the Apical Papilla: Mineralization Potential and Inflammatory Response.” Frontiers in cellular and infection microbiology 13: 1257433.

2022

Laurent T, Kumar P, Liese S, et al. Architecture of the chikungunya virus replication organelle. Elife. 2022;11. doi:10.7554/eLife.83042

Rosendal E, Mihai IS, Becker M, et al. Serine Protease Inhibitors Restrict Host Susceptibility to SARS-CoV-2 Infections. MBio. 2022;13(3):e0089222. doi:10.1128/mbio.00892-22

Malla S, Prasad Bhattarai D, Groza P, et al. ZFP207 sustains pluripotency by coordinating OCT4 stability, alternative splicing and RNA export. EMBO Rep. 2022;23(3):e53191. doi: https://doi.org/10.15252/embr.202153191

Mediavilla T, Özalay Ö, Estévez-Silva HM, et al. Learning-related contraction of gray matter in rodent sensorimotor cortex is associated with adaptive myelination. Elife. 2022;11. doi:10.7554/eLife.77432

Wang T, Sarwar M, Whitchurch JB, et al. PIP5K1α is Required for Promoting Tumor Progression in Castration-Resistant Prostate Cancer. Front cell Dev Biol. 2022;10:798590. doi:10.3389/fcell.2022.798590

Niggemeyer G, Knyazeva A, Gasper R, et al. Synthesis of 20-Membered Macrocyclic Pseudo-Natural Products Yields Inducers of LC3 Lipidation. Angew Chem Int Ed Engl. 2022;61(11):e202114328. doi:10.1002/anie.202114328

Liu K-C, Pace H, Larsson E, et al. Membrane insertion mechanism of the caveola coat protein Cavin1. Proc Natl Acad Sci U S A. 2022;119(25):e2202295119. doi:10.1073/pnas.2202295119

Xin X, Zhang Y, Gaetani M, et al. Ultrafast and selective labeling of endogenous proteins using affinity-based benzotriazole chemistry. Chem Sci. 2022;13(24):7240-7246. doi:10.1039/d1sc05974b

Jia X, Knyazeva A, Zhang Y, et al. V. cholerae MakA is a cholesterol-binding pore-forming toxin that induces non-canonical autophagy. J Cell Biol. 2022;221(12). doi:10.1083/jcb.202206040

Nadeem A, Berg A, Pace H, et al. Protein-lipid interaction at low pH induces oligomerization of the MakA cytotoxin from Vibrio cholerae. Elife. 2022;11. doi:10.7554/eLife.73439

Tadala L, Langenbach D, Dannborg M, et al. Infection-induced membrane ruffling initiates danger and immune signaling via the mechanosensor PIEZO1. Cell Rep. 2022;40(6):111173. doi: https://doi.org/10.1016/j.celrep.2022.111173

Deiana M, Josse P, Dalinot C, et al. Site-selected thionated benzothioxanthene chromophores as heavy-atom-free small-molecule photosensitizers for photodynamic therapy. Commun Chem. 2022;5(1):142. doi:10.1038/s42004-022-00752-x

Maurya DK, Berghard A, Bohm S. A multivesicular body-like organelle mediates stimulus-regulated trafficking of olfactory ciliary transduction proteins. Nat Commun. 2022;13(1):6889. doi:10.1038/s41467-022-34604-y

Abidine Y, Liu L, Wallén O, et al. Cellular Chondroitin Sulfate and the Mucin-like Domain of Viral Glycoprotein C Promote Diffusion of Herpes Simplex Virus 1 While Heparan Sulfate Restricts Mobility. Viruses. 2022;14(8). doi:10.3390/v14081836

Latest update: 2026-06-24