Publications

DiVA Publications

Pathogenesis of relapsing fever

Current Issues in Molecular Biology, Caister Academic Press 2022, Vol. 42 : 519-550

Lopez, Job; Hovius, Joppe W.; Bergström, Sven

A 23-Gene Classifier urine test for prostate cancer prognosis

Clinical and translational medicine, John Wiley & Sons 2021, Vol. 11, (3)

Guo, Jinan; Johnson, Heather; Zhang, Xuhui; et al.

ALK ligand ALKAL2 potentiates MYCN-driven neuroblastoma in the absence of ALK mutation

EMBO Journal, John Wiley & Sons 2021, Vol. 40, (3)

Borenas, Marcus; Umapathy, Ganesh; Lai, Wei-Yun; et al.

Binding of non-canonical peptidoglycan controls Vibrio cholerae broad spectrum racemase activity

Computational and Structural Biotechnology Journal, Elsevier 2021, Vol. 19 : 1119-1126

Espaillat, Akbar; Carrasco-López, Cesar; Bernardo-García, Noelia; et al.

BipA exerts temperature-dependent translational control of biofilm-associated colony morphology in Vibrio cholerae

eLIFE, eLife Sciences Publications Ltd. 2021, Vol. 10

del Peso Santos, Teresa; Alvarez, Laura; Sit, Brandon; et al.

Class a penicillin-binding protein-mediated cell wall synthesis promotes structural integrity during peptidoglycan endopeptidase insufficiency in vibrio cholerae

mBio, American Society for Microbiology 2021, Vol. 12, (2)

Murphy, Shannon G.; Murtha, Andrew N.; Zhao, Ziyi; et al.

Co- and polymicrobial infections in the gut mucosa: the host-microbiota-pathogen perspective

Cellular Microbiology, John Wiley & Sons 2021, Vol. 23, (2)

Frisan, Teresa

CpxR regulates the Rcs phosphorelay system in controlling the Ysc-Yop type III secretion system in Yersinia pseudotuberculosis

Microbiology, Microbiology Society 2021, Vol. 167, (1)

Fei, Keke; Chao, Hong-Jun; Hu, Yangbo; et al.

CRISPR-based subtyping to track the evolutionary history of a global clone of Acinetobacter baumannii

Infection, Genetics and Evolution, Elsevier 2021, Vol. 90

Karah, Nabil; Wai, Sun Nyunt; Uhlin, Bernt Eric

D-canavanine affects peptidoglycan structure, morphogenesis and fitness in Rhizobiales

Environmental Microbiology

Aliashkevich, Alena; Howell, Matthew; Brown, Pamela J.B.; et al.

Disinfection chemicals mode of action on the bacterial spore structure and their Raman spectra

Analytical Chemistry, American Chemical Society (ACS) 2021, Vol. 93, (6) : 3146-3153

Malyshev, Dmitry; Dahlberg, Tobias; Wiklund, Krister; et al.

Eco-evolutionary feedbacks mediated by bacterial membrane vesicles

FEMS Microbiology Reviews, Oxford University Press 2021, Vol. 45, (2)

Zlatkov, Nikola; Nadeem, Aftab; Uhlin, Bernt Eric; et al.

Genomic characterization of relapsed acute myeloid leukemia reveals novel putative therapeutic targets

Blood Advances, American Society of Hematology 2021, Vol. 5, (3) : 900-912

Stratmann, Svea; Yones, Sara A.; Mayrhofer, Markus; et al.

Host cell death during infection with Chlamydia: a double-edged sword

FEMS Microbiology Reviews, Oxford University Press 2021, Vol. 45, (1)

Sixt, Barbara Susanne

Influence of the microenvironment on modulation of the host response by typhoid toxin

Cell reports, Cell Press 2021, Vol. 35, (1)

Martin, Océane C.B.; Bergonzini, Anna; Lopez Chiloeches, Maria; et al.

Interaction of artemisinin protects the activity of antioxidant enzyme catalase: a biophysical study

International Journal of Biological Macromolecules, Elsevier 2021, Vol. 172 : 418-428

Samal, Rashmi R.; Kumari, Kanchan; Sahoo, Yashaswinee; et al.

JAK3 Is Expressed in the Nucleus of Malignant T Cells in Cutaneous T Cell Lymphoma (CTCL).

Cancers, Vol. 13, (2)

Vadivel, Chella Krishna; Gluud, Maria; Torres-Rusillo, Sara; et al.

L-Arabinose Induces the Formation of Viable Nonproliferating Spheroplasts in Vibrio cholerae

Applied and Environmental Microbiology, American Society for Microbiology 2021, Vol. 87, (5)

Espinosa, Elena; Daniel, Sandra; Hernández, Sara B.; et al.

Meta-analysis of gene popularity: Less than half of gene citations stem from gene regulatory networks

Genes, mdpi 2021, Vol. 12, (2) : 1-13

Mihai, Ionut Sebastian; Das, Debojyoti; Maršalkaite, Gabija; et al.

Metabolomic profiling reveals plasma GlycA and GlycB as a potential biomarkers for treatment efficiency in rheumatoid arthritis

Journal of Pharmaceutical and Biomedical Analysis, Elsevier 2021, Vol. 197

Dudka, Ilona; Chachaj, Angelika; Sebastian, Agata; et al.

miRNA-mediated alteration of sulfatase modifying factor 1 expression using self-assembled branched DNA nanostructures

RSC Advances, Royal Society of Chemistry 2021, Vol. 11, (18) : 10670-10680

Kumari, Kanchan; Kar, Avishek; Nayak, Ashok K.; et al.

Molecular mechanisms and biological consequences of the production of non-canonical D-amino acids in bacteria

Umeå University medical dissertations, 2139

Aliashkevich, Alena

Molecular mechanisms of Yersinia pseudotuberculosis for adaptation and establishment of infection in host tissue

Umeå University medical dissertations

Mahmud, A. K. M. Firoj

Mycobacterium tuberculosis Rv3160c is a TetR-like transcriptional repressor that regulates expression of the putative oxygenase Rv3161c

Scientific Reports, Springer Nature 2021, Vol. 11, (1)

Tükenmez, Hasan; Sarkar, Souvik; Anoosheh, Saber; et al.

Neuronal diversity and convergence in a visual system developmental atlas

Nature, Nature Publishing Group 2021, Vol. 589 : 88-95

Özel, Mehmet Neset; Simon, Felix; Jafari, Shadi; et al.

Odor response adaptation in Drosophila: a continuous individualization process

Cell and Tissue Research, Springer 2021, Vol. 83, (1) : 143-148

Jafari, Shadi; Alenius, Mattias

Pbp4 is likely involved in cell division of the longitudinally dividing bacterium candidatus thiosymbion oneisti

Antibiotics, MDPI 2021, Vol. 10, (3) : 1-17

Wang, Jinglan; Alvarez, Laura; Bulgheresi, Silvia; et al.

Phosphatidic acid-mediated binding and mammalian cell internalization of the Vibrio cholerae cytotoxin MakA

PLoS Pathogens, Public Library of Science 2021, Vol. 17, (3)

Nadeem, Aftab; Alam, Athar; Toh, Eric; et al.

Protecting healthcare workers in conflict zones during the COVID-19 pandemic: Northwest Syria

Journal of Infection

Almhawish, Naser; Karah, Nabil; Elferruh, Yasir; et al.

Regulation of Decay Accelerating Factor Primes Human Germinal Center B Cells for Phagocytosis

Frontiers in Immunology, Frontiers Media S.A. 2021, Vol. 11

Dernstedt, Andy; Leidig, Jana; Holm, Anna; et al.

Revisiting nocturnal heart rate and heart rate variability in insomnia: A polysomnography-based comparison of young self-reported good and poor sleepers

Journal of Sleep Research

Cosgrave, Jan; Phillips, Jessica; Haines, Ross; et al.

Ribosome association primes the stringent factor Rel for tRNA-dependent locking in the A-site and activation of (p)ppGpp synthesis

Nucleic Acids Research, Oxford University Press 2021, Vol. 49, (1) : 444-457

Takada, Hiraku; Roghanian, Mohammad; Caballero-Montes, Julien; et al.

Spatiotemporal Variations in Growth Rate and Virulence Plasmid Copy Number during Yersinia pseudotuberculosis Infection

Infection and Immunity, American Society for Microbiology 2021, Vol. 89, (4)

Schneiders, Stephan; Hechard, Tifaine; Edgren, Tomas; et al.

Structure of Erm-modified 70S ribosome reveals the mechanism of macrolide resistance

Nature Chemical Biology

Svetlov, Maxim S.; Syroegin, Egor A.; Aleksandrova, Elena V.; et al.

Suppression of β-catenin signaling in colon carcinoma cells by a bacterial protein

International Journal of Cancer

Nadeem, Aftab; Aung, Kyaw Min; Ray, Tanusree; et al.

Systematic Identification of Plasmodium Falciparum Sporozoite Membrane Protein Interactions Reveals an Essential Role for the p24 Complex in Host Infection

Molecular & Cellular Proteomics, Elsevier 2021, Vol. 20

Knöckel, Julia; Dundas, Kirsten; Yang, Annie S.P.; et al.

The antimalarial efficacy and mechanism of resistance of the novel chemotype DDD01034957

Scientific Reports, Springer Nature 2021, Vol. 11, (1)

Miguel-Blanco, Celia; Murithi, James M.; Benavente, Ernest Diez; et al.

Transcriptome Profiling of Staphylococcus aureus Associated Extracellular Vesicles Reveals Presence of Small RNA-Cargo

Frontiers in Molecular Biosciences, Frontiers Media S.A. 2021, Vol. 7

Joshi, Bishnu; Singh, Bhupender; Nadeem, Aftab; et al.

Vibrio cholerae cytotoxin MakA induces noncanonical autophagy resulting in the spatial inhibition of canonical autophagy

Journal of Cell Science, The Company of Biologists 2021, Vol. 134, (5)

Corkery, Dale; Nadeem, Aftab; Aung, Kyaw Min; et al.

A collection of bacterial isolates from the pig intestine reveals functional and taxonomic diversity

Nature Communications, Nature Publishing Group 2020, Vol. 11, (1)

Wylensek, David; Hitch, Thomas C. A.; Riedel, Thomas; et al.

A Cyclic-di-GMP signalling network regulates biofilm formation and surface associated motility of Acinetobacter baumannii 17978

Scientific Reports, Nature Publishing Group 2020, Vol. 10, (1)

Ahmad, Irfan; Nygren, Evelina; Khalid, Fizza; et al.

A holin/peptidoglycan hydrolase-dependent protein secretion system

Molecular Microbiology

Palmer, Tracy; Finney, Alexander; Saha, Chayan Kumar; et al.

A Novel Chemically Differentiated Mouse Embryonic Stem Cell-Based Model to Study Liver Stages of Plasmodium berghei

Stem cell reports, Elsevier 2020, Vol. 14, (6) : 1123-1134

Tripathi, Jaishree; Segeritz, Charis-Patricia; Griffiths, Gareth; et al.

A Novel Growth-Based Selection Strategy Identifies New Constitutively Active Variants of the Major Virulence Regulator PrfA in Listeria monocytogenes

Journal of Bacteriology, American Society for Microbiology 2020, Vol. 202, (11)

Hansen, Sabine; Hall, Michael; Grundström, Christin; et al.

A nucleotide-switch mechanism mediates opposing catalytic activities of Rel enzymes

Nature Chemical Biology, Nature Publishing Group 2020, Vol. 16, (8) : 834-840

Tamman, Hedvig; Van Nerom, Katleen; Takada, Hiraku; et al.

A single-nucleotide polymorphism in a Plasmodium berghei ApiAP2 transcription factor alters the development of host immunity

Science Advances, American Association for the Advancement of Science 2020, Vol. 6, (6)

Akkaya, Munir; Bansal, Abhisheka; Sheehan, Patrick W.; et al.

A widespread toxin-antitoxin system exploiting growth control via alarmone signaling

Proceedings of the National Academy of Sciences of the United States of America, National Academy of Sciences 2020, Vol. 117, (19) : 10500-10510

Jimmy, Steffi; Saha, Chayan Kumar; Kurata, Tatsuaki; et al.

Activity-dependent regulation of translation in olfactory sensory neurons of naris- occluded mice

Chemical Senses, Oxford University Press 2020, Vol. 45, (2) : 142-143

Maurya, Devendra Kumar; Bohm, Staffan

Adaptation of Vibrio cholerae to Hypoxic Environments

Frontiers in Microbiology, Frontiers Media S.A. 2020, Vol. 11

Bueno, Emilio; Pinedo, Victor; Cava, Felipe

Airborne microbial biodiversity and seasonality in Northern and Southern Sweden

PeerJ, PeerJ 2020, Vol. 8

Karlsson, Edvin; Johansson, Anna-Mia; Ahlinder, Jon; et al.

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