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Publications at the Department of Molecular Biology

DiVA Publications

A hyperpromiscuous antitoxin protein domain for the neutralization of diverse toxin domains
Proceedings of the National Academy of Sciences of the United States of America, National Academy of Sciences 2022, Vol. 119, (6)
Kurata, Tatsuaki; Saha, Chayan Kumar; Buttress, Jessica A.; et al.
Acid stress signals are integrated into the σb-dependent general stress response pathway via the stressosome in the food-borne pathogen Listeria monocytogenes
PLoS Pathogens, Public Library of Science 2022, Vol. 18, (3)
Guerreiro, Duarte N.; Pucciarelli, M. Graciela; Tiensuu, Teresa; et al.
Antibiotics Use and Subsequent Risk of Colorectal Cancer: A Swedish Nationwide Population-Based Study
Journal of the National Cancer Institute, Oxford University Press 2022, Vol. 114, (1) : 38-46
Lu, Sai San Moon; Mohammed, Zahraa; Häggström, Christel; et al.
Bacterial developmental checkpoint that directly monitors cell surface morphogenesis
Developmental Cell, Elsevier 2022, Vol. 57, (3) : 344-360
Delerue, Thomas; Anantharaman, Vivek; Gilmore, Michael C.; et al.
Bioinformatics, evolution and revolution in our understanding of toxin-antitoxin systems
Umeå University medical dissertations, 2172
Saha, Chayan Kumar
Bone mineral: A trojan horse for bone cancers. Efficient mitochondria targeted delivery and tumor eradication with nano hydroxyapatite containing doxorubicin
Materials Today Bio, Elsevier 2022, Vol. 14
Liu, Yang; Nadeem, Aftab; Sebastian, Sujeesh; et al.
Brucella melitensis Wzm/Wzt System: Changes in the Bacterial Envelope Lead to Improved Rev1Δwzm Vaccine Properties
Frontiers in Microbiology, Frontiers Media S.A. 2022, Vol. 13
Mena-Bueno, Sara; Poveda-Urkixo, Irati; Irazoki, Oihane; et al.
Cellular organization in lab-evolved and extant multicellular species obeys a maximum entropy law
eLIFE, eLife Sciences Publications 2022, Vol. 11
Day, Thomas C.; Höhn, Stephanie S.; Zamani-Dahaj, Seyed A.; et al.
Clinically observed deletions in SARS-CoV-2 Nsp1 affect its stability and ability to inhibit translation
FEBS Letters, John Wiley & Sons 2022, Vol. 596, (9) : 1203-1213
Kumar, Pravin; Schexnaydre, Erin; Rafie, Karim; et al.
Comparative pathology of dog and human prostate cancer
Veterinary medicine and science, John Wiley & Sons 2022, Vol. 8, (1) : 110-120
Ryman-Tubb, Toby; Lothion-Roy, Jennifer H.; Metzler, Veronika M.; et al.
Cpx-signalling facilitates Hms-dependent biofilm formation by Yersinia pseudotuberculosis
npj Biofilms and Microbiomes, London: Nature Publishing Group 2022, Vol. 8, (1)
Kumar Gahlot, Dharmender; Wai, Sun Nyunt; Erickson, David L.; et al.
CRISPR/Cas9 and genetic screens in malaria parasites: small genomes, big impact
Biochemical Society Transactions, Portland Press 2022, Vol. 50, (3) : 1069-1079
Ishizaki, Takahiro; Hernandez, Sophia; Paoletta, Martina S.; et al.
Distinct effects on the secretion of MTRAP and AMA1 in Plasmodium yoelii following deletion of acylated pleckstrin homology domain-containing protein
Parasitology international, Vol. 86
Chaiyawong, Nattawat; Ishizaki, Takahiro; Hakimi, Hassan; et al.
EFEMP1 rare variants cause familial juvenile-onset open-angle glaucoma
Human Mutation, John Wiley & Sons 2022, Vol. 43, (2) : 240-252
Collantes, Edward Ryan A.; Delfin, Manuel S.; Fan, Baojian; et al.
Evolution of biomarker research in autoimmunity conditions for health professionals and clinical practice
Progress in Molecular Biology and Translational Science
Silverstein, Arthur; Dudaev, Anton; Studneva, Maria; et al.
Extracting Circadian and Sleep Parameters from Longitudinal Data in Schizophrenia for the Design of Pragmatic Light Interventions
Schizophrenia Bulletin, Oxford University Press 2022, Vol. 48, (2) : 447-456
Skeldon, Anne C.; Dijk, Derk-Jan; Meyer, Nicholas; et al.
Fluorescent Molecularly Imprinted Polymer Layers against Sialic Acid on Silica-Coated Polystyrene Cores — Assessment of the Binding Behavior to Cancer Cells
Cancers, MDPI 2022, Vol. 14, (8)
Beyer, Sarah; Kimani, Martha; Zhang, Yuecheng; et al.
Gene-Mutation-Based Algorithm for Prediction of Treatment Response in Colorectal Cancer Patients
Cancers, MDPI 2022, Vol. 14, (8)
Johnson, Heather; El-Schich, Zahra; Amjad, Ali; et al.
Hedgehogs reglerande roll av kolhydrater i Drosophila Melanogaster
Ankarberg, Ossian
Hsa-Mir-320c, Hsa-Mir-200c-3p, and Hsa-Mir-449c-5p as Potential Specific miRNA Biomarkers of COPD: A Pilot Study
Pathophysiology, MDPI 2022, Vol. 29, (2) : 143-157
Cerón-Pisa, Noemi; Iglesias, Amanda; Shafiek, Hanaa; et al.
Impact of genome reduction in microsporidia
Microsporidia: current advances in biology, Cham: Springer 2022 : 1-42
Jespersen, Nathan; Monrroy, Leonardo; Barandun, Jonas
Impaired oxygen-sensitive regulation of mitochondrial biogenesis within the von Hippel–Lindau syndrome
Nature Metabolism, Nature Publishing Group 2022, Vol. 4, (6) : 739-758
Li, Shuijie; Li, Wenyu; Yuan, Juan; et al.
Induction of AmpC-Mediated β-Lactam Resistance Requires a Single Lytic Transglycosylase in Agrobacterium tumefaciens
Applied and Environmental Microbiology, American Society for Microbiology 2022, Vol. 88, (12)
Figueroa-Cuilan, Wanda M.; Howell, Matthew; Richards, Christopher; et al.
Inhibition of the master regulator of Listeria monocytogenes virulence enables bacterial clearance from spacious replication vacuoles in infected macrophages
PLoS Pathogens, Public Library Science 2022, Vol. 18, (1)
Tran, Thao Thanh; Mathmann, Carmen D.; Gatica-Andrades, Marcela; et al.
Keeping the home intact—lessons from Chlamydia
Cell Host and Microbe, Cell Press 2022, Vol. 30, (4) : 475-479
Sixt, Barbara Susanne
Listeria monocytogenes requires the RsbX protein to prevent SigB-activation under non-stressed conditions
Journal of Bacteriology, American Society for Microbiology 2022, Vol. 204, (1)
de Oliveira, Ana Henriques; Tiensuu, Teresa; Guerreiro, Duarte N.; et al.
Low risk for microbial contamination of syringe and tube feeding bag surfaces after multiple reuses with home blenderized tube feeding
Nutrition in clinical practice
Milton, Debra L.; Murphy, Brie; Johnson, Teresa W.; et al.
Lytic transglycosylases mitigate periplasmic crowding by degrading soluble cell wall turnover products
eLIFE, eLife Sciences Publications Ltd 2022, Vol. 11
Weaver, Anna; Alvarez, Laura; Rosch, Kelly; et al.
m6A RNA immunoprecipitation followed by high-throughput sequencing to map N6-Methyladenosine
Post-transcriptional gene regulation, Humana Press 2022 : 355-362
Bhattarai, Devi Prasad; Aguilo, Francesca
MODOMICS: a database of RNA modification pathways. 2021 update
Nucleic Acids Research, Oxford University Press 2022, Vol. 50, (D1) : D231-D235
Boccaletto, Pietro; Stefaniak, Filip; Ray, Angana; et al.
Modulation of RNA stability regulates gene expression in two opposite ways: through buffering of RNA levels upon global perturbations and by supporting adapted differential expression
Nucleic Acids Research, Oxford University Press 2022, Vol. 50, (8) : 4372-4388
Faucillion, Marie-Line; Johansson, Anna-Mia; Larsson, Jan
Outlook on the gut microbiota
Gastroenterology Report, Oxford University Press 2022, Vol. 10
Schröder, Björn
Parvimonas micra is associated with tumour immune profiles in molecular subtypes of colorectal cancer
Cancer Immunology and Immunotherapy
Löwenmark, Thyra; Li, Xingru; Löfgren Burström, Anna; et al.
Pathogenesis of relapsing fever
Current Issues in Molecular Biology, Caister Academic Press 2022, Vol. 42 : 519-550
Lopez, Job; Hovius, Joppe W.; Bergström, Sven
Peptidoglycan editing in non-proliferating intracellular Salmonella as source of interference with immune signaling
PLoS Pathogens, Public Library of Science 2022, Vol. 18, (1)
Hernández, Sara B.; Castanheira, Sónia; Graciela Pucciarelli, M.; et al.
PIP5K1α is Required for Promoting Tumor Progression in Castration-Resistant Prostate Cancer
Frontiers in Cell and Developmental Biology, Frontiers Media S.A. 2022, Vol. 10
Wang, Tianyan; Sarwar, Martuza; Whitchurch, Jonathan B.; et al.
Polar mutagenesis of polycistronic bacterial transcriptional units using Cas12a
Microbial Cell Factories, BioMed Central 2022, Vol. 21, (1)
Graffeuil, Antoine; Guerrero-Castro, Julio; Assefa, Aster; et al.
Protein-lipid interaction at low pH induces oligomerization of the MakA cytotoxin from Vibrio cholerae
eLIFE, eLife Sciences Publications, Ltd 2022, Vol. 11
Nadeem, Aftab; Berg, Alexandra; Pace, Hudson; et al.
Rare variants in the outcome of social skills group training for autism
Autism Research, John Wiley & Sons 2022, Vol. 15, (3) : 434-446
Li, Danyang; Choque Olsson, Nora; Becker, Martin; et al.
RpuS/R Is a Novel Two-Component Signal Transduction System That Regulates the Expression of the Pyruvate Symporter MctP in Sinorhizobium fredii NGR234
Frontiers in Microbiology, Frontiers Media S.A. 2022, Vol. 13
Ramos, Ana Laura; Aquino, Maria; García, Gema; et al.
Sal-type ABC-F proteins: intrinsic and common mediators of pleuromutilin resistance by target protection in staphylococci
Nucleic Acids Research, Oxford University Press 2022, Vol. 50, (4) : 2128-2142
Mohamad, Merianne; Nicholson, David; Saha, Chayan Kumar; et al.
Structural basis for PoxtA-mediated resistance to phenicol and oxazolidinone antibiotics
Nature Communications, Nature Publishing Group 2022, Vol. 13, (1)
Crowe-McAuliffe, Caillan; Murina, Victoriia; Turnbull, Kathryn Jane; et al.
Teleclinical Microbiology: An Innovative Approach to Providing Web-Enabled Diagnostic Laboratory Services in Syria
American Journal of Clinical Pathology, Oxford University Press 2022, Vol. 157, (4) : 554-560
Karah, Nabil; Antypas, Konstantinos; Al-Toutanji, Anas; et al.
The genomic architecture of the passerine MHC region: High repeat content and contrasting evolutionary histories of single copy and tandemly duplicated MHC genes
Molecular Ecology Resources
Westerdahl, Helena; Mellinger, Samantha; Sigeman, Hanna; et al.
The Gut Microbiota and Host Metabolism
Evolution, Biodiversity and a Reassessment of the Hygiene Hypothesis, Springer Nature 2022 : 141-175
Schröder, Björn
The gut microbiota prime systemic antiviral immunity via the cGAS-STING-IFN-I axis
Immunity, Cell Press 2022, Vol. 55, (5) : 847-861
Erttmann, Saskia F.; Swacha, Patrycja; Aung, Kyaw Min; et al.
Transcriptomic analysis reveals proinflammatory signatures associated with acute myeloid leukemia progression
Blood Advances, American Society of Hematology 2022, Vol. 6, (1) : 152-164
Stratmann, Svea; Yones, Sara A.; Garbulowski, Mateusz; et al.
Transposon activity, local duplications and propagation of structural variants across haplotypes drive the evolution of the Drosophila S2 cell line
BMC Genomics, BioMed Central 2022, Vol. 23, (1)
Lewerentz, Jacob; Johansson, Anna-Mia; Larsson, Jan; et al.
Type III secretion by Yersinia pseudotuberculosis is reliant upon an authentic N-terminal YscX secretor domain
Molecular Microbiology, John Wiley & Sons 2022, Vol. 117, (4) : 886-906
Gurung, Jyoti M.; Amer, Ayad A. A.; Chen, Shiyun; et al.
Utility of novel drug targets for treatment of metastatic cancer
Umeå University medical dissertations, 2179
Wang, Tianyan
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