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Pedro Ojeda May
Kontakt
E-post
pedro.ojeda-may@umu.se
Telefon
Verksam vid
Anknytning
Första forskningsingenjör vid
Högpresterande beräkningscentrum Norr (HPC2N)
Plats
MIT huset, Campustorget 5, 2 tr, B213
Umeå universitet, 901 87 Umeå
Publikationer
Publikationer
2023
Mechanistic basis for a connection between the catalytic step and slow opening dynamics of adenylate kinase
Journal of Chemical Information and Modeling
, American Chemical Society (ACS) 2023, Vol. 63, (5) : 1556-1569
Dulko-Smith, Beata; Ojeda-May, Pedro; Ådén, Jörgen; et al.
2022
Exploring the Dynamics of Shikimate Kinase through Molecular Mechanics
Biophysica
, MDPI 2022, Vol. 2, (3) : 194-202
Ojeda-May, Pedro
2021
The SARS-CoV-2 spike protein is vulnerable to moderate electric fields
Nature Communications
, Springer Nature 2021, Vol. 12, (1)
Arbeitman, Claudia R.; Rojas, Pablo; Ojeda-May, Pedro; et al.
2021
Best Practice Guide: Modern Accelerators
Bispo, João; Barbosa, Jorge G.; Silva, Pedro Filipe; et al.
2021
Exploring the Mechanism of Shikimate Kinase through Quantum Mechanical and Molecular Mechanical (QM/MM) Methods
Biophysica
, Basel, Switzerland: MDPI 2021, Vol. 1, (3) : 334-343
Ojeda-May, Pedro
2021
Dynamic Connection between Enzymatic Catalysis and Collective Protein Motions
Biochemistry
, American Chemical Society (ACS) 2021, Vol. 60, (28) : 2246-2258
Ojeda-May, Pedro; Ul Mushtaq, Ameeq; Rogne, Per; et al.
2018
Mapping Free Energy Pathways for ATP Hydrolysis in the E. coli ABC Transporter HlyB by the String Method
Molecules
, MDPI 2018, Vol. 23, (10) : 1-22
Zhou, Yan; Ojeda-May, Pedro; Nagaraju, Mulpuri; et al.
2017
Acceleration of Semiempirical QM/MM Methods through Message Passage Interface (MPI), Hybrid MPI/Open Multiprocessing, and Self-Consistent Field Accelerator Implementations
Journal of Chemical Theory and Computation
, Vol. 13, (8) : 3525-3536
Ojeda-May, Pedro; Nam, Kwangho
2015
Role of Protein Dynamics in Allosteric Control of the Catalytic Phosphoryl Transfer of Insulin Receptor Kinase
Journal of the American Chemical Society
, Vol. 137, (39) : 12454-12457
Ojeda-May, Pedro; Li, Yaozong; Ovchinnikov, Victor; et al.
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