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Umeå universitet
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Personalbild Johan Trygg

Johan Trygg

Professor i Kemometri med fokus på multivariat data analys, AI/djup inlärning och simulering inom life science, medicin och läkemedelsindustri.

Kontakt

E-post
johan.trygg@umu.se
Telefon
090-786 69 17, 0730-64 71 37

Verksam vid

Anknytning
Professor vid Kemiska institutionen
Plats
KB.B4, Linnaeus väg 10, (rum: C4.13.19) Umeå universitet, 901 87 Umeå
2019
Metabolic profiling of zebrafish embryo development from blastula period to early larval stages
PLoS ONE, San Francisco: Public Library of Science 2019, Vol. 14, (5)
Dhillon, Sundeep S.; Torell, Frida; Donten, Magdalena; et al.
2019
Ultrasound imaging of dorsal neck muscles with speckle tracking analyses: the relationship between muscle deformation and force
Scientific Reports, Nature Publishing Group 2019, Vol. 9
Peterson, Gunnel; O'Leary, Shaun; Nilsson, David; et al.
2019
A geographically matched control population efficiently limits the number of candidate disease-causing variants in an unbiased whole-genome analysis
PLoS ONE, Public Library of Science 2019, Vol. 14, (3)
Rentoft, Matilda; Svensson, Daniel; Sjödin, Andreas; et al.
2019
Joint and unique multiblock analysis for integration and calibration transfer of NIR instruments
Analytical Chemistry, Washington: American Chemical Society (ACS) 2019, Vol. 91, (5) : 3516-3524
Skotare, Tomas; Nilsson, David; Xiong, Shaojun; et al.
2019
Joint and unique multiblock analysis of biological data: multiomics malaria study
Faraday discussions (Online), Cambridge: Royal Society of Chemistry 2019, Vol. 218 : 268-283
Surowiec, Izabella; Skotare, Tomas; Sjögren, Rickard; et al.
2019
doepipeline: a systematic approach to optimizing multi-level and multi-step data processing workflows
BMC Bioinformatics, BioMed Central 2019, Vol. 20, (1)
Svensson, Daniel; Sjögren, Rickard; Sundell, David; et al.
2019
Cytokine Profiles in Autoantibody Defined Subgroups of Systemic Lupus Erythematosus
Journal of Proteome Research, American Chemical Society (ACS) 2019, Vol. 18, (3) : 1208-1217
Torell, Frida; Eketjäll, Susanna; Idborg, Helena; et al.
2018
A multi-omics approach reveals function of Secretory Carrier-Associated Membrane Proteins in wood formation of​ ​​Populus​​ ​trees
BMC Genomics, Springer Publishing Company 2018, Vol. 19
Obudulu, Ogonna; Mähler, Niklas; Skotare, Tomas; et al.
2018
Neck-specific exercise improves impaired interactions between ventral neck muscles in chronic whiplash: A randomized controlled ultrasound study
Scientific Reports, Nature Publishing Group 2018, Vol. 8
Peterson, Gunnel; Nilsson, David; Trygg, Johan; et al.
2018
Alterations in the Mechanical Response of Deep Dorsal Neck Muscles in Individuals Experiencing Whiplash-Associated Disorders Compared to Healthy Controls: An Ultrasound Study
American Journal of Physical Medicine & Rehabilitation, LIPPINCOTT WILLIAMS & WILKINS 2018, Vol. 97, (2) : 75-82
Rahnama, Leila; Peterson, Gunnel; Kazemnejad, Anoshirvan; et al.
2018
OnPLS-Based Multi-Block Data Integration: A Multivariate Approach to Interrogating Biological Interactions in Asthma
Analytical Chemistry, AMER CHEMICAL SOC 2018, Vol. 90, (22) : 13400-13408
Reinke, Stacey N.; Galindo-Prieto, Beatriz; Skotare, Tomas; et al.
2018
Multivariate patent analysis: using chemometrics to analyze collections of chemical and pharmaceutical patents
Journal of Chemometrics
Sjögren, Rickard; Stridh, Kjell; Skotare, Tomas; et al.
2018
Visualization of descriptive multiblock analysis
Journal of Chemometrics
Skotare, Tomas; Sjögren, Rickard; Surowiec, Izabella; et al.
2018
Quantification of run order effect on chromatography: mass spectrometry profiling data
Journal of Chromatography A, Vol. 1568 : 229-234
Surowiec, Izabella; Johansson, Erik; Stenlund, Hans; et al.
2018
Metabolic Profiling of Multiorgan Samples: Evaluation of MODY5/RCAD Mutant Mice
Journal of Proteome Research, American Chemical Society (ACS) 2018, Vol. 17, (7) : 2293-2306
Torell, Frida; Bennet, Kate; Cereghini, Silvia; et al.
2017
Haralick texture features from apparent diffusion coefficient (ADC) MRI images depend on imaging and pre-processing parameters
Scientific Reports, Nature Publishing Group 2017, Vol. 7
Brynolfsson, Patrik; Nilsson, David; Torheim, Turid; et al.
2017
Protein expression in tension wood formation monitored at high tissue resolution in Populus
Journal of Experimental Botany, Oxford University Press 2017, Vol. 68, (13) : 3405-3417
Bygdell, Joakim; Srivastava, Vaibhav; Obudulu, Ogonna; et al.
2017
Dysregulations in circulating sphingolipids associate with disease activity indices in female patients with systemic lupus erythematosus: a cross-sectional study
Lupus, SAGE PUBLICATIONS LTD 2017, Vol. 26, (10) : 1023-1033
Checa, A.; Idborg, H.; Zandian, A.; et al.
2017
A new approach for variable influence on projection (VIP) in O2PLS models
Chemometrics and Intelligent Laboratory Systems, Elsevier 2017, Vol. 160 : 110-124
Galindo-Prieto, Beatriz; Trygg, Johan; Geladi, Paul
2017
Association between pathology and texture features of multi parametric MRI of the prostate
Physics in Medicine and Biology, Vol. 62, (19) : 7833-7854
Kuess, Peter; Andrzejewski, Piotr; Nilsson, David; et al.
2017
Lipid response patterns in acute phase paediatric Plasmodium falciparum malaria
Metabolomics, Vol. 13, (4)
Orikiiriza, Judy; Surowiec, Izabella; Lindquist, Elisabeth; et al.
2017
The oxylipin and endocannabidome responses in acute phase Plasmodium falciparum malaria in children
Malaria Journal, BIOMED CENTRAL LTD 2017, Vol. 16
Surowiec, Izabella; Gouveia-Figueira, Sandra; Orikiiriza, Judy; et al.
2017
Multivariate strategy for the sample selection and integration of multi-batch data in metabolomics
Metabolomics, SPRINGER 2017, Vol. 13, (10)
Surowiec, Izabella; Johansson, Erik; Torell, Frida; et al.
2017
Generalized Subset Designs in Analytical Chemistry
Analytical Chemistry, American Chemical Society (ACS) 2017, Vol. 89, (12) : 6491-6497
Surowiec, Izabella; Vikström, Ludvig; Hector, Gustaf; et al.
2017
The effects of thawing on the plasma metabolome: evaluating differences between thawed plasma and multi-organ samples
Metabolomics, Springer 2017, Vol. 13, (6)
Torell, Frida; Bennett, Kate; Rännar, Stefan; et al.
2016
Metabolic Profiling of Systemic Lupus Erythematosus and Comparison with Primary Sjögren’s Syndrome and Systemic Sclerosis
PLoS ONE, Vol. 11, (7)
Bengtsson, Anders A.; Trygg, Johan; Wuttge, Dirk M.; et al.
2016
Chemometric Analysis of Bacterial Peptidoglycan Reveals Atypical Modifications That Empower the Cell Wall against Predatory Enzymes and Fly Innate Immunity
Journal of the American Chemical Society, American Chemical Society (ACS) 2016, Vol. 138, (29) : 9193-9204
Espaillat, Akbar; Forsmo, Oskar; El Biari, Khouzaima; et al.
2016
Strong invaders are strong defenders: implications for the resistance of invaded communities
Ecology Letters, Vol. 19, (4) : 487-494
Henriksson, Anna; Wardle A., David; Trygg, Johan; et al.
2016
Weighted species richness outperforms species richness as predictor of biotic resistance
Ecology, Vol. 97, (1) : 262-271
Henriksson, Anna; Yu, Jun; Wardle A., David; et al.
2016
Postprandial metabolomics: A pilot mass spectrometry and NMR study of the human plasma metabolome in response to a challenge meal
Analytica Chimica Acta, Elsevier: 2016, Vol. 908 : 121-131
Karimpour, Masoumeh; Surowiec, Izabella; Wu, Junfang; et al.
2016
Mechanical properties of the trapezius during scapular elevation in people with chronic whiplash associated disorders: A case-control ultrasound speckle tracking analysis
Manual Therapy, Vol. 21 : 177-182
Landén Ludvigsson, Maria; Peterson, Gunnel; Jull, Gwendolen; et al.
2016
Quantitative proteomics reveals protein profiles underlying major transitions in aspen wood development
BMC Genomics, Vol. 17
Obudulu, Ogonna; Bygdell, Joakim; Sundberg, Bjorn; et al.
2016
Altered mechanical deformation of the trapezius and multifidus muscles registered with ultrasonography in women with chronic whiplash-associated disorders
Manual Therapy, Vol. 25 : e58-
Peolsson, A.; Peterson, G.; Trygg, Johan; et al.
2016
Multivariate analysis of ultrasound-recorded dorsal strain sequences: Investigation of dynamic neck extensions in women with chronic whiplash associated disorders
Scientific Reports, Vol. 6
Peolsson, Anneli; Peterson, Gunnel; Trygg, Johan; et al.
2016
Changes in dorsal neck muscle function in individuals with chronic whiplash-associated disorders: a real-time ultrasound case-control study
Ultrasound in Medicine and Biology, Vol. 42, (5) : 1090-1102
Peterson, Gunnel; Nilsson, David; Peterson, Simon; et al.
2016
Heterozygous colon cancer-associated mutations of SAMHD1 have functional significance
Proceedings of the National Academy of Sciences of the United States of America, Vol. 113, (17) : 4723-4728
Rentoft, Matilda; Lindell, Kristoffer; Tran, Phong; et al.
2016
Metabolomics study of fatigue in patients with rheumatoid arthritis na < ve to biological treatment
Rheumatology International, Vol. 36, (5) : 703-711
Surowiec, Izabella; Gjesdal, Clara Gram; Jonsson, Grete; et al.
2016
Multi-platform metabolomics assays for human lung lavage fluids in an air pollution exposure study
Analytical and Bioanalytical Chemistry, Vol. 408, (17) : 4751-4764
Surowiec, Izabella; Karimpour, Masoumeh; Gouveia-Figueira, Sandra; et al.
2016
Metabolite and Lipid Profiling of Biobank Plasma Samples Collected Prior to Onset of Rheumatoid Arthritis
PLoS ONE, Vol. 11, (10)
Surowiec, Izabella; Ärlestig, Lisbeth; Rantapää-Dahlqvist, Solbritt; et al.
2016
Tissue sample stability: thawing effect on multi-organ samples
Metabolomics, Springer 2016, Vol. 12, (2)
Torell, Frida; Bennett, Kate; Cereghini, Silvia; et al.
2015
Variable influence on projection (VIP) for OPLS models and its applicability in multivariate time series analysis
Chemometrics and Intelligent Laboratory Systems, Elsevier 2015, Vol. 146 : 297-304
Galindo-Prieto, Beatriz; Eriksson, Lennart; Trygg, Johan
2015
A Multivariate Approach Using Attenuated Total Reflectance Mid-infrared Spectroscopy To Measure the Surface Mannoproteins and beta-Glucans of Yeast Cell Walls during Wine Fermentations
Journal of Agricultural and Food Chemistry, Vol. 63, (45) : 10054-10063
Moore, John P.; Zhang, Song-Lei; Nieuwoudt, Helene; et al.
2015
Preliminary evaluation of dorsal muscle activity during resisted cervical extension in patients with longstanding pain and disability following anterior cervical decompression and fusion surgery
Physiotherapy, Vol. 101, (1) : 69-74
Peolsson, A.; Peolsson, Michael; Jull, G.; et al.
2015
Altered ventral neck muscle deformation for individuals with whiplash associated disorder compared to healthy controls: A case-control ultrasound study
Manual Therapy, Elsevier 2015, Vol. 20, (2) : 319-327
Peterson, Gunnel; Dedering, Åsa; Andersson, Erika; et al.
2015
Novel insights into the interplay between ventral neck muscles in individuals with whiplash-associated disorders
Scientific Reports, Nature Publishing Group 2015, Vol. 5
Peterson, Gunnel; Nilsson, David; Trygg, Johan; et al.
2015
OPLS in batch monitoring - Opens up new opportunities
Analytica Chimica Acta, Vol. 857 : 28-38
Souihi, Nabil; Lindegren, Anders; Eriksson, Lennart; et al.
2015
Near-infrared chemical imaging (NIR-CI) on roll compacted ribbons and tablets - multivariate mapping of physical and chemical properties
International Journal of Pharmaceutics, Vol. 483, (1-2) : 200-211
Souihi, Nabil; Nilsson, David; Josefson, Mats; et al.
2015
Roll compaction process modeling: transfer between equipment and impact of process parameters
International Journal of Pharmaceutics, Vol. 484, (1-2) : 192-206
Souihi, Nabil; Reynolds, Gavin; Tajarobi, Pirjo; et al.
2015
Metabolic signature profiling as a diagnostic and prognostic tool in paediatric Plasmodium falciparum malaria
Open Forum Infectious Diseases, Oxford University Press 2015, Vol. 2, (2)
Surowiec, Izabella; Orikiiriza, Judy; Karlsson, Elisabeth; et al.
2015
Complete Genome Sequence of Francisella guangzhouensis Strain 08HL01032(T), Isolated from Air-Conditioning Systems in China
Microbiology Resource Announcements, Washington: American Society for Microbiology 2015, Vol. 3, (2)
Svensson, Daniel; Öhrman, Caroline; Bäckman, Stina; et al.
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